{"id":75,"date":"2023-01-31T20:53:09","date_gmt":"2023-01-31T20:53:09","guid":{"rendered":"https:\/\/supervised-morphogenesis.eu\/?page_id=75"},"modified":"2026-08-28T14:51:15","modified_gmt":"2026-08-28T14:51:15","slug":"publications","status":"publish","type":"page","link":"https:\/\/supervised-morphogenesis.eu\/index.php\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n

SUMO has committed itself to disseminate their discoveries via preprint servers (e.g., BioRxiv), followed by publication in peer-reviewed journals that target a broad audience. A list of publications can be found below.<\/p>\n\n\n\n

<\/p>\n\n\n\n

Smirnova NP, Ponomartsev SV, Ali TML, Lycke M, Chung BK, \u00d8gaard J, Melum E, Combriat T, Veenvliet JV, Krauss S. (2026): Modular engineering of embryonic-extraembryonic interactions generates advanced gastruloid morphotypes.<\/strong>
bioRxiv 2025.11.09.687163<\/em>
https:\/\/doi.org\/10.1101\/2025.11.09.687163<\/a><\/p>\n\n\n\n

Jiang L, Benjamin K, Veenvliet JV, Roff E, Harrington HA. (2026): Diversity in transcriptomics without cell types<\/strong>
bioRxiv 2026.07.13.735796<\/em>
https:\/\/doi.org\/10.64898\/2026.07.13.735796<\/a><\/p>\n\n\n\n

Delon LC, Busek M, Lal DL, Heesakkers RC, Wergeland TJ, Stokowiec J, Socha AJ, Combriat TM, Golovin A, Boichuk Y, Krauss S. (2026): Extracellular matrix properties, interstitial flow, and VEGF gradients shape trophoblast behavior in a pumpless Trophoblast Invasion-on-Chip (TIoC)<\/strong>.
Biomaterials. 2026 Apr 30:334:124230<\/em>
https:\/\/doi.org\/10.1016\/j.biomaterials.2026.124230<\/a><\/p>\n\n\n\n

Bentzen HB, Gaillard M, Nachman I, Reumann D, Gadegaard N, David L, Lanner F, Moris N, Pasque V, Rivron N, Sozen B, Isasi R, Krauss S, Veenvliet JV. (2026): A guide to using embedded ethics in human stem-cell-based embryo model research.<\/strong>
Nat Cell Biol. 2026 Apr;28(4):665-673<\/em>.
https:\/\/doi.org\/10.1038\/s41556-026-01909-9<\/a><\/p>\n\n\n\n

Trani-Bustos M, Savill RG, Boutillon A, Posp\u00ed\u0161il P, Conkar D, Froeb C, Soltwedel JR, van de Wouw HL, Sletten EM, Veenvliet JV, Camp\u00e0s O. (2025): Tissue surface mechanics constrains proliferation-driven forces to guide mammalian body axis elongation.<\/strong>
bioRxiv 2025.10.27.684710<\/em>
https:\/\/doi.org\/10.1101\/2025.10.27.684710<\/a><\/p>\n\n\n\n

Savill RG, Villaronga-Luque A, Bustos MT, Maroudas-Sacks Y, Batki J, Meissner A, Ryan AQ, Modes CD, Camp\u00e0s O, Veenvliet JV (2025): SpinePy enables automated 3D spatiotemporal quantification of multicellular in vitro systems.<\/strong>
bioRxiv 2025.09.10.674634<\/em>
https:\/\/doi.org\/10.1101\/2025.09.10.674634<\/a><\/p>\n\n\n\n

Rouatbi R, Cardona J-E S, Villaronga-Luque A, Veenvliet JV, Sbalzarini IF. (2025): A Continuous and Interpretable Morphometric for Robust Quantification of Dynamic Biological Shapes<\/strong>.
arXiv:2410.21004<\/em>
https:\/\/doi.org\/10.48550\/arXiv.2410.21004<\/a><\/p>\n\n\n\n

Villaronga-Luque A, Savill RG, L\u00f3pez-Anguita N, Bolondi A, Garai S, Gassaloglu SI, Rouatbi R, Schmeisser K, Poddar A, Bauer L, Alves T, Traikov S, Rodenfels J, Chavakis T, Bulut-Karslioglu A, Veenvliet JV. (2025): Integrated molecular-phenotypic profiling reveals metabolic control of morphological variation in a stem-cell-based embryo model. <\/strong>
Cell Stem Cell. 32(5):759-777.e13<\/em>.
https:\/\/doi.org\/10.1016\/j.stem.2025.03.012<\/a><\/p>\n\n\n\n

Isasi, R., Bentzen, H. B., Fabbri, M., Fuhr, A., Glover, J. C., Mah, N., Mascalzoni, D., Mueller, S., Seltmann, S., & Kurtz, A. (2024): Dynamic governance: A new era for consent for stem cell research. <\/strong>
Stem cell reports, 19(9), 1233\u20131241. <\/em>
https:\/\/doi.org\/10.1016\/j.stemcr.2024.07.006<\/a><\/p>\n\n\n\n

Martinez Arias, A., Rivron, N., Moris, N., Tam, P., Alev, C., Fu, J., Hadjantonakis, A. K., Hanna, J. H., Minchiotti, G., Pourquie, O., Sheng, G., Solnica Krezel, L., Veenvliet, J. V., & Warmflash, A. (2024): Criteria for the standardization of stem-cell-based embryo models. <\/strong>
Nat Cell Biol. 2024 Oct;26(10):1625-1628.<\/em>
https:\/\/doi.org\/10.1038\/s41556-024-01492-x<\/a>.
Self-archived pre-typeset version for download here: https:\/\/supervised-morphogenesis.eu\/wp-content\/uploads\/2025\/08\/NCB_Criteria_Standardization_SEM_accepted.pdf<\/a><\/p>\n\n\n\n

Bentzen HB (2024): Human organoids: Things or data?<\/strong> 
Dove ES (Ed.), Confidentiality, Privacy, and Data Protection in Biomedicine. International Concepts and Issues. Routledge. ISSN 9781032495866. pp. 293\u2013314.<\/em> 
https:\/\/www.taylorfrancis.com\/chapters\/edit\/10.4324\/9781003394518-15\/human-organoids-heidi-beate-bentzen<\/a><\/p>\n\n\n\n

Farag, N., Schiff, C., & Nachman, I. (2024): Coordination between endoderm progression and gastruloid elongation controls endodermal morphotype choice.<\/strong>
Dev Cell. 2024 Sep 9;59(17):2364-2374.e4.<\/em>
https:\/\/doi.org\/10.1016\/j.devcel.2024.05.017<\/a><\/p>\n\n\n\n

Avni L, Farag N, Ghosh B, Nachmann I. (2023): Gastruloid optimization<\/strong>.
Emerg Top Life Sci. 2023 Dec 18;7(4):409-415.<\/em>
https:\/\/doi.org\/10.1042\/etls20230096<\/a><\/p>\n\n\n\n

Biasiotto R, Viberg Johansson J, Alemu MB, Romano V, Bentzen HB, Kaye J,… Mascalzoni D. (2023): Public Preferences for Digital Health Data Sharing: Discrete Choice Experiment Study in 12 European Countries.<\/strong>
J Med Internet Res. 2023 Nov 23:25:e47066. doi: 10.2196\/47066.<\/em>
https:\/\/doi.org\/10.2196\/47066<\/a><\/p>\n\n\n\n

<\/p>\n\n\n\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

SUMO has committed itself to disseminate their discoveries via preprint servers (e.g., BioRxiv), followed by publication in peer-reviewed journals that target a broad audience. A list of publications can be found below. Smirnova NP, Ponomartsev SV, Ali TML, Lycke M, Chung BK, \u00d8gaard J, Melum E, Combriat T, Veenvliet JV, Krauss S. (2026): Modular engineering […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-75","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/pages\/75","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/comments?post=75"}],"version-history":[{"count":15,"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/pages\/75\/revisions"}],"predecessor-version":[{"id":592,"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/pages\/75\/revisions\/592"}],"wp:attachment":[{"href":"https:\/\/supervised-morphogenesis.eu\/index.php\/wp-json\/wp\/v2\/media?parent=75"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}